Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UbbP0CG49 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
UbbP0CG49 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UbbP0CG49 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UbbP0CG49 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.8□□□□□ -0.36
UbbP0CG49 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UbbP0CG49 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UbbP0CG49 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
UbbP0CG49 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.8□□□□□ -0.36
UbbP0CG49 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UbbP0CG49 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.79□□□□□ -0.36
UbbP0CG49 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.79□□□□□ -0.36
UbbP0CG49 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.79□□□□□ -0.36
UbbP0CG49 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.79□□□□□ -0.36
UbbP0CG49 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UbbP0CG49 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UbbP0CG49 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UbbP0CG49 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.79□□□□□ -0.36
UbbP0CG49 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UbbP0CG49 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.79□□□□□ -0.36
UbbP0CG49 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.79□□□□□ -0.36
UbbP0CG49 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UbbP0CG49 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
UbbP0CG49 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UbbP0CG49 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.78□□□□□ -0.36
UbbP0CG49 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.78□□□□□ -0.36
UbbP0CG49 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
UbbP0CG49 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.78□□□□□ -0.36
UbbP0CG49 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
UbbP0CG49 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UbbP0CG49 Gm7284-201ENSMUST00000131667 944 ntBASIC12.78□□□□□ -0.36
UbbP0CG49 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.78□□□□□ -0.36
UbbP0CG49 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
UbbP0CG49 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.78□□□□□ -0.36
UbbP0CG49 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.78□□□□□ -0.36
UbbP0CG49 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.78□□□□□ -0.36
UbbP0CG49 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.78□□□□□ -0.36
UbbP0CG49 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.78□□□□□ -0.36
UbbP0CG49 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
UbbP0CG49 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UbbP0CG49 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
UbbP0CG49 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms