Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
NefmP08553 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NefmP08553 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.72■■□□□ 1.07
NefmP08553 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.72■■□□□ 1.07
NefmP08553 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
NefmP08553 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC21.72■■□□□ 1.07
NefmP08553 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NefmP08553 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NefmP08553 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
NefmP08553 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC21.71■■□□□ 1.07
NefmP08553 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NefmP08553 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.71■■□□□ 1.07
NefmP08553 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.71■■□□□ 1.07
NefmP08553 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Gm18246-201ENSMUST00000221023 728 ntBASIC21.71■■□□□ 1.07
NefmP08553 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NefmP08553 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NefmP08553 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NefmP08553 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
NefmP08553 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NefmP08553 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NefmP08553 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NefmP08553 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NefmP08553 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NefmP08553 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NefmP08553 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NefmP08553 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC21.7■■□□□ 1.06
NefmP08553 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC21.7■■□□□ 1.06
NefmP08553 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.7■■□□□ 1.06
NefmP08553 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NefmP08553 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC21.7■■□□□ 1.06
NefmP08553 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NefmP08553 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC21.7■■□□□ 1.06
NefmP08553 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC21.7■■□□□ 1.06
NefmP08553 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NefmP08553 AC119177.1-201ENSMUST00000227647 1332 ntBASIC21.7■■□□□ 1.06
NefmP08553 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
NefmP08553 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NefmP08553 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NefmP08553 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NefmP08553 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NefmP08553 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NefmP08553 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
NefmP08553 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NefmP08553 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NefmP08553 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
NefmP08553 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NefmP08553 Gm13464-201ENSMUST00000119418 935 ntBASIC21.69■■□□□ 1.06
NefmP08553 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NefmP08553 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NefmP08553 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NefmP08553 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NefmP08553 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NefmP08553 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NefmP08553 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC21.68■■□□□ 1.06
NefmP08553 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NefmP08553 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms