Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sod1P08228 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.73□□□□□ -0.21
Sod1P08228 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sod1P08228 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.72□□□□□ -0.21
Sod1P08228 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sod1P08228 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.72□□□□□ -0.21
Sod1P08228 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sod1P08228 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sod1P08228 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.72□□□□□ -0.21
Sod1P08228 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Sod1P08228 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.72□□□□□ -0.21
Sod1P08228 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sod1P08228 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.72□□□□□ -0.21
Sod1P08228 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.72□□□□□ -0.21
Sod1P08228 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sod1P08228 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sod1P08228 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sod1P08228 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sod1P08228 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.71□□□□□ -0.21
Sod1P08228 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Gm12882-201ENSMUST00000121696 517 ntBASIC13.71□□□□□ -0.21
Sod1P08228 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.71□□□□□ -0.21
Sod1P08228 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sod1P08228 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.71□□□□□ -0.21
Sod1P08228 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.71□□□□□ -0.21
Sod1P08228 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.71□□□□□ -0.21
Sod1P08228 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.71□□□□□ -0.21
Sod1P08228 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.71□□□□□ -0.21
Sod1P08228 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Gm19220-201ENSMUST00000222682 803 ntBASIC13.71□□□□□ -0.21
Sod1P08228 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.71□□□□□ -0.21
Sod1P08228 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.71□□□□□ -0.21
Sod1P08228 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sod1P08228 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sod1P08228 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sod1P08228 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sod1P08228 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sod1P08228 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sod1P08228 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sod1P08228 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sod1P08228 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.71□□□□□ -0.22
Sod1P08228 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sod1P08228 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sod1P08228 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.7□□□□□ -0.22
Sod1P08228 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.7□□□□□ -0.22
Sod1P08228 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Sod1P08228 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sod1P08228 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sod1P08228 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.7□□□□□ -0.22
Sod1P08228 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Sod1P08228 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.7□□□□□ -0.22
Sod1P08228 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sod1P08228 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sod1P08228 Mir6392-201ENSMUST00000184924 108 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms