Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.45□□□□□ -0.1
Hoxa4P06798 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.45□□□□□ -0.1
Hoxa4P06798 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.45□□□□□ -0.1
Hoxa4P06798 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Hoxa4P06798 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.45□□□□□ -0.1
Hoxa4P06798 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Hoxa4P06798 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Hoxa4P06798 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.44□□□□□ -0.1
Hoxa4P06798 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa4P06798 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa4P06798 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.44□□□□□ -0.1
Hoxa4P06798 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Gm29541-201ENSMUST00000191351 678 ntBASIC14.44□□□□□ -0.1
Hoxa4P06798 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa4P06798 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.44□□□□□ -0.1
Hoxa4P06798 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Hoxa4P06798 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Hoxa4P06798 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Carlr-201ENSMUST00000181515 2574 ntBASIC14.43□□□□□ -0.1
Hoxa4P06798 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Gm7774-201ENSMUST00000200064 533 ntBASIC14.43□□□□□ -0.1
Hoxa4P06798 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Sybu-209ENSMUST00000228639 4113 ntBASIC14.43□□□□□ -0.1
Hoxa4P06798 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Hoxa4P06798 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Hoxa4P06798 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Hoxa4P06798 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Hoxa4P06798 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.42□□□□□ -0.1
Hoxa4P06798 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxa4P06798 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.42□□□□□ -0.1
Hoxa4P06798 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Hoxa4P06798 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxa4P06798 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.42□□□□□ -0.1
Hoxa4P06798 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
Hoxa4P06798 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Hoxa4P06798 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Hoxa4P06798 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms