Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Krt1P04104 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Matn2-206ENSMUST00000228570 2798 ntBASIC13.9□□□□□ -0.18
Krt1P04104 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Krt1P04104 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Krt1P04104 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Krt1P04104 Gm8520-201ENSMUST00000186517 868 ntBASIC13.9□□□□□ -0.18
Krt1P04104 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.9□□□□□ -0.18
Krt1P04104 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.9□□□□□ -0.18
Krt1P04104 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.9□□□□□ -0.18
Krt1P04104 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt1P04104 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.9□□□□□ -0.18
Krt1P04104 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Krt1P04104 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Krt1P04104 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Krt1P04104 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Krt1P04104 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Krt1P04104 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Krt1P04104 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Krt1P04104 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Krt1P04104 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.89□□□□□ -0.19
Krt1P04104 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Krt1P04104 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.89□□□□□ -0.19
Krt1P04104 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.89□□□□□ -0.19
Krt1P04104 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.89□□□□□ -0.19
Krt1P04104 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.89□□□□□ -0.19
Krt1P04104 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.89□□□□□ -0.19
Krt1P04104 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
Krt1P04104 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.89□□□□□ -0.19
Krt1P04104 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Krt1P04104 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt1P04104 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Krt1P04104 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.88□□□□□ -0.19
Krt1P04104 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Krt1P04104 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Krt1P04104 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Gm8344-201ENSMUST00000119813 856 ntBASIC13.88□□□□□ -0.19
Krt1P04104 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.88□□□□□ -0.19
Krt1P04104 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.88□□□□□ -0.19
Krt1P04104 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.88□□□□□ -0.19
Krt1P04104 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.88□□□□□ -0.19
Krt1P04104 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Gm5417-201ENSMUST00000079706 384 ntBASIC13.88□□□□□ -0.19
Krt1P04104 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Krt1P04104 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Krt1P04104 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt1P04104 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Krt1P04104 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.88□□□□□ -0.19
Krt1P04104 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.88□□□□□ -0.19
Krt1P04104 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms