Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Gm12008-201ENSMUST00000117791 755 ntBASIC10.76□□□□□ -0.69
TcraP01849 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC10.76□□□□□ -0.69
TcraP01849 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TcraP01849 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
TcraP01849 Gm9987-201ENSMUST00000069768 567 ntBASIC10.76□□□□□ -0.69
TcraP01849 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
TcraP01849 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
TcraP01849 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
TcraP01849 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
TcraP01849 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
TcraP01849 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC10.75□□□□□ -0.69
TcraP01849 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TcraP01849 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Gm9013-201ENSMUST00000132939 882 ntBASIC10.75□□□□□ -0.69
TcraP01849 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.75□□□□□ -0.69
TcraP01849 Gm44430-201ENSMUST00000203376 995 ntBASIC10.75□□□□□ -0.69
TcraP01849 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 AC127302.2-201ENSMUST00000215212 268 ntBASIC10.75□□□□□ -0.69
TcraP01849 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
TcraP01849 Gm18032-201ENSMUST00000222541 538 ntBASIC10.75□□□□□ -0.69
TcraP01849 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
TcraP01849 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
TcraP01849 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.75□□□□□ -0.69
TcraP01849 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC10.75□□□□□ -0.69
TcraP01849 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
TcraP01849 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
TcraP01849 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.74□□□□□ -0.69
TcraP01849 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.74□□□□□ -0.69
TcraP01849 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
TcraP01849 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.74□□□□□ -0.69
TcraP01849 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
TcraP01849 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
TcraP01849 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
TcraP01849 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC10.74□□□□□ -0.69
TcraP01849 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
TcraP01849 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
TcraP01849 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC10.74□□□□□ -0.69
TcraP01849 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.74□□□□□ -0.69
TcraP01849 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
TcraP01849 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
TcraP01849 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Gm43056-201ENSMUST00000197865 2791 ntBASIC10.74□□□□□ -0.69
TcraP01849 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.74□□□□□ -0.69
TcraP01849 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.74□□□□□ -0.69
TcraP01849 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TcraP01849 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
TcraP01849 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.73□□□□□ -0.69
TcraP01849 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TcraP01849 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms