Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.08■□□□□ 0
Syn1O88935 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.08■□□□□ 0
Syn1O88935 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.08■□□□□ 0
Syn1O88935 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Syn1O88935 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.08■□□□□ 0
Syn1O88935 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.08■□□□□ 0
Syn1O88935 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Syn1O88935 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Syn1O88935 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.07■□□□□ 0
Syn1O88935 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Syn1O88935 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.07■□□□□ 0
Syn1O88935 Gm9229-201ENSMUST00000222777 126 ntBASIC15.07■□□□□ 0
Syn1O88935 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Syn1O88935 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.07■□□□□ 0
Syn1O88935 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Syn1O88935 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Syn1O88935 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Syn1O88935 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Syn1O88935 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Syn1O88935 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.06■□□□□ 0
Syn1O88935 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 App-207ENSMUST00000227737 2827 ntBASIC15.06■□□□□ 0
Syn1O88935 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.06■□□□□ 0
Syn1O88935 Gm6222-201ENSMUST00000120787 396 ntBASIC15.06■□□□□ 0
Syn1O88935 Gm12329-201ENSMUST00000120829 1007 ntBASIC15.06■□□□□ 0
Syn1O88935 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.06■□□□□ 0
Syn1O88935 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.06■□□□□ 0
Syn1O88935 Gm27631-201ENSMUST00000184163 466 ntBASIC15.06■□□□□ 0
Syn1O88935 Gm43179-201ENSMUST00000198797 275 ntBASIC15.06■□□□□ 0
Syn1O88935 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.06■□□□□ 0
Syn1O88935 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Syn1O88935 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
Syn1O88935 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.06■□□□□ 0
Syn1O88935 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.06■□□□□ 0
Syn1O88935 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Syn1O88935 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Syn1O88935 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Syn1O88935 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.05■□□□□ 0
Syn1O88935 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Syn1O88935 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.05■□□□□ 0
Syn1O88935 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Syn1O88935 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Syn1O88935 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.05■□□□□ 0
Syn1O88935 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Syn1O88935 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.05■□□□□ -0
Syn1O88935 Mir3547-201ENSMUST00000175461 88 ntBASIC15.05■□□□□ -0
Syn1O88935 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.05■□□□□ -0
Syn1O88935 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.05■□□□□ -0
Syn1O88935 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.05■□□□□ -0
Syn1O88935 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.05■□□□□ -0
Syn1O88935 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.05■□□□□ -0
Syn1O88935 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Syn1O88935 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Syn1O88935 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms