Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hcn3O88705 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hcn3O88705 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn3O88705 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn3O88705 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn3O88705 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.08□□□□□ -0.15
Hcn3O88705 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn3O88705 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn3O88705 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hcn3O88705 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hcn3O88705 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.08□□□□□ -0.16
Hcn3O88705 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hcn3O88705 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Hcn3O88705 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.08□□□□□ -0.16
Hcn3O88705 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.08□□□□□ -0.16
Hcn3O88705 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Hcn3O88705 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.08□□□□□ -0.16
Hcn3O88705 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hcn3O88705 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.08□□□□□ -0.16
Hcn3O88705 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Hcn3O88705 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hcn3O88705 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.08□□□□□ -0.16
Hcn3O88705 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.07□□□□□ -0.16
Hcn3O88705 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Hcn3O88705 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.07□□□□□ -0.16
Hcn3O88705 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.07□□□□□ -0.16
Hcn3O88705 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.07□□□□□ -0.16
Hcn3O88705 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.07□□□□□ -0.16
Hcn3O88705 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Hcn3O88705 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.07□□□□□ -0.16
Hcn3O88705 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Hcn3O88705 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hcn3O88705 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hcn3O88705 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.06□□□□□ -0.16
Hcn3O88705 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.06□□□□□ -0.16
Hcn3O88705 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hcn3O88705 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms