Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tgfbr3O88393 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tgfbr3O88393 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tgfbr3O88393 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tgfbr3O88393 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.94□□□□□ -0.18
Tgfbr3O88393 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.94□□□□□ -0.18
Tgfbr3O88393 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tgfbr3O88393 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tgfbr3O88393 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tgfbr3O88393 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Gm8515-201ENSMUST00000194852 576 ntBASIC13.93□□□□□ -0.18
Tgfbr3O88393 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.93□□□□□ -0.18
Tgfbr3O88393 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tgfbr3O88393 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tgfbr3O88393 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.92□□□□□ -0.18
Tgfbr3O88393 Gm8749-201ENSMUST00000117737 331 ntBASIC13.92□□□□□ -0.18
Tgfbr3O88393 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.92□□□□□ -0.18
Tgfbr3O88393 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.92□□□□□ -0.18
Tgfbr3O88393 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tgfbr3O88393 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.91□□□□□ -0.18
Tgfbr3O88393 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Tgfbr3O88393 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Gm12138-201ENSMUST00000122180 951 ntBASIC13.91□□□□□ -0.18
Tgfbr3O88393 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.91□□□□□ -0.18
Tgfbr3O88393 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Gm43433-201ENSMUST00000196573 481 ntBASIC13.91□□□□□ -0.18
Tgfbr3O88393 Gm9229-201ENSMUST00000222777 126 ntBASIC13.91□□□□□ -0.18
Tgfbr3O88393 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.91□□□□□ -0.18
Tgfbr3O88393 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tgfbr3O88393 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms