Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc4a4O88343 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Slc4a4O88343 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc4a4O88343 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc4a4O88343 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Slc4a4O88343 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc4a4O88343 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc4a4O88343 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc4a4O88343 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc4a4O88343 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc4a4O88343 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc4a4O88343 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.33■□□□□ 0.36
Slc4a4O88343 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc4a4O88343 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.33■□□□□ 0.36
Slc4a4O88343 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Slc4a4O88343 Gm27430-201ENSMUST00000184585 107 ntBASIC17.33■□□□□ 0.36
Slc4a4O88343 Gm44333-201ENSMUST00000197168 107 ntBASIC17.33■□□□□ 0.36
Slc4a4O88343 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc4a4O88343 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.33■□□□□ 0.36
Slc4a4O88343 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc4a4O88343 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc4a4O88343 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Slc4a4O88343 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Slc4a4O88343 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Slc4a4O88343 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.32■□□□□ 0.36
Slc4a4O88343 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Slc4a4O88343 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Slc4a4O88343 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.32■□□□□ 0.36
Slc4a4O88343 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Gm6415-201ENSMUST00000118488 348 ntBASIC17.32■□□□□ 0.36
Slc4a4O88343 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.32■□□□□ 0.36
Slc4a4O88343 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slc4a4O88343 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Slc4a4O88343 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Slc4a4O88343 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Slc4a4O88343 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Slc4a4O88343 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.31■□□□□ 0.36
Slc4a4O88343 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Slc4a4O88343 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Slc4a4O88343 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Slc4a4O88343 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Slc4a4O88343 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Slc4a4O88343 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Slc4a4O88343 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Gm15693-201ENSMUST00000120470 637 ntBASIC17.3■□□□□ 0.36
Slc4a4O88343 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.3■□□□□ 0.36
Slc4a4O88343 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 AA543401-201ENSMUST00000164248 1269 ntBASIC17.3■□□□□ 0.36
Slc4a4O88343 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.3■□□□□ 0.36
Slc4a4O88343 Gm18766-201ENSMUST00000189811 808 ntBASIC17.3■□□□□ 0.36
Slc4a4O88343 Gm9182-201ENSMUST00000217829 639 ntBASIC17.3■□□□□ 0.36
Slc4a4O88343 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Slc4a4O88343 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Slc4a4O88343 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Slc4a4O88343 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms