Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Syt7-204ENSMUST00000223586 1344 ntBASIC15.31■□□□□ 0.04
Ttc3O88196 Gm14042-201ENSMUST00000120139 833 ntBASIC15.31■□□□□ 0.04
Ttc3O88196 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.31■□□□□ 0.04
Ttc3O88196 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ttc3O88196 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Ttc3O88196 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ttc3O88196 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Ttc3O88196 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.3■□□□□ 0.04
Ttc3O88196 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.3■□□□□ 0.04
Ttc3O88196 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Syt7-205ENSMUST00000224135 1557 ntBASIC15.3■□□□□ 0.04
Ttc3O88196 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ttc3O88196 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ttc3O88196 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.29■□□□□ 0.04
Ttc3O88196 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ttc3O88196 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ttc3O88196 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Ttc3O88196 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.29■□□□□ 0.04
Ttc3O88196 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ttc3O88196 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.29■□□□□ 0.04
Ttc3O88196 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.29■□□□□ 0.04
Ttc3O88196 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Ttc3O88196 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ttc3O88196 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.29■□□□□ 0.04
Ttc3O88196 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.29■□□□□ 0.04
Ttc3O88196 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC15.29■□□□□ 0.04
Ttc3O88196 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ttc3O88196 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ttc3O88196 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ttc3O88196 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ttc3O88196 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.28■□□□□ 0.04
Ttc3O88196 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Ttc3O88196 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.28■□□□□ 0.04
Ttc3O88196 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.28■□□□□ 0.04
Ttc3O88196 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.28■□□□□ 0.04
Ttc3O88196 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.28■□□□□ 0.04
Ttc3O88196 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ttc3O88196 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ttc3O88196 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ttc3O88196 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.28■□□□□ 0.04
Ttc3O88196 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Ttc3O88196 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ttc3O88196 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ttc3O88196 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms