Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pja1O55176 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pja1O55176 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pja1O55176 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pja1O55176 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pja1O55176 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Pja1O55176 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.53■□□□□ 0.08
Pja1O55176 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pja1O55176 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pja1O55176 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pja1O55176 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pja1O55176 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pja1O55176 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.52■□□□□ 0.08
Pja1O55176 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pja1O55176 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pja1O55176 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pja1O55176 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Pja1O55176 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pja1O55176 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pja1O55176 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.52■□□□□ 0.08
Pja1O55176 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pja1O55176 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pja1O55176 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pja1O55176 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.52■□□□□ 0.08
Pja1O55176 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.52■□□□□ 0.08
Pja1O55176 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pja1O55176 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pja1O55176 Gm6550-201ENSMUST00000187574 993 ntBASIC15.52■□□□□ 0.08
Pja1O55176 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pja1O55176 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.52■□□□□ 0.08
Pja1O55176 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.52■□□□□ 0.08
Pja1O55176 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pja1O55176 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.52■□□□□ 0.07
Pja1O55176 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pja1O55176 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pja1O55176 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.51■□□□□ 0.07
Pja1O55176 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Pja1O55176 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Gm13464-201ENSMUST00000119418 935 ntBASIC15.51■□□□□ 0.07
Pja1O55176 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pja1O55176 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.51■□□□□ 0.07
Pja1O55176 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.51■□□□□ 0.07
Pja1O55176 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.51■□□□□ 0.07
Pja1O55176 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Pja1O55176 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.51■□□□□ 0.07
Pja1O55176 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pja1O55176 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pja1O55176 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Pja1O55176 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pja1O55176 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.5■□□□□ 0.07
Pja1O55176 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.5■□□□□ 0.07
Pja1O55176 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Gm9726-201ENSMUST00000180321 678 ntBASIC15.5■□□□□ 0.07
Pja1O55176 Gm6376-201ENSMUST00000209407 580 ntBASIC15.5■□□□□ 0.07
Pja1O55176 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Rps4l-201ENSMUST00000071745 943 ntBASIC15.5■□□□□ 0.07
Pja1O55176 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.5■□□□□ 0.07
Pja1O55176 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pja1O55176 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.5■□□□□ 0.07
Pja1O55176 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Pja1O55176 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pja1O55176 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.5■□□□□ 0.07
Pja1O55176 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pja1O55176 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pja1O55176 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pja1O55176 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pja1O55176 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pja1O55176 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pja1O55176 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pja1O55176 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms