Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.65□□□□□ -0.38
DffbO54788 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
DffbO54788 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
DffbO54788 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.65□□□□□ -0.39
DffbO54788 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
DffbO54788 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
DffbO54788 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
DffbO54788 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.64□□□□□ -0.39
DffbO54788 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
DffbO54788 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
DffbO54788 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
DffbO54788 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.64□□□□□ -0.39
DffbO54788 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.64□□□□□ -0.39
DffbO54788 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.64□□□□□ -0.39
DffbO54788 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.64□□□□□ -0.39
DffbO54788 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
DffbO54788 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.64□□□□□ -0.39
DffbO54788 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.64□□□□□ -0.39
DffbO54788 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
DffbO54788 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.64□□□□□ -0.39
DffbO54788 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
DffbO54788 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
DffbO54788 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DffbO54788 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.63□□□□□ -0.39
DffbO54788 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DffbO54788 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
DffbO54788 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
DffbO54788 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.63□□□□□ -0.39
DffbO54788 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
DffbO54788 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm4535-201ENSMUST00000182274 558 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44357-201ENSMUST00000195897 142 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm19658-201ENSMUST00000196231 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44367-201ENSMUST00000196836 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44350-201ENSMUST00000197197 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44390-201ENSMUST00000197533 144 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44313-201ENSMUST00000198018 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44486-201ENSMUST00000198508 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44314-201ENSMUST00000199263 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44394-201ENSMUST00000199558 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44484-201ENSMUST00000199873 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44466-201ENSMUST00000200264 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm44359-201ENSMUST00000200671 138 ntBASIC12.63□□□□□ -0.39
DffbO54788 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.63□□□□□ -0.39
DffbO54788 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.63□□□□□ -0.39
DffbO54788 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Gm10355-201ENSMUST00000097146 517 ntBASIC12.63□□□□□ -0.39
DffbO54788 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
DffbO54788 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DffbO54788 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
DffbO54788 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.62□□□□□ -0.39
DffbO54788 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms