Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Stag2O35638 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Stag2O35638 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.82■□□□□ 0.28
Stag2O35638 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.82■□□□□ 0.28
Stag2O35638 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.82■□□□□ 0.28
Stag2O35638 Gm22175-201ENSMUST00000175007 78 ntBASIC16.82■□□□□ 0.28
Stag2O35638 Gm9824-201ENSMUST00000178707 561 ntBASIC16.82■□□□□ 0.28
Stag2O35638 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.82■□□□□ 0.28
Stag2O35638 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.82■□□□□ 0.28
Stag2O35638 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.82■□□□□ 0.28
Stag2O35638 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Stag2O35638 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Stag2O35638 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.82■□□□□ 0.28
Stag2O35638 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.82■□□□□ 0.28
Stag2O35638 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Stag2O35638 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Stag2O35638 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Stag2O35638 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Stag2O35638 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Stag2O35638 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Gm18049-201ENSMUST00000208909 581 ntBASIC16.81■□□□□ 0.28
Stag2O35638 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Stag2O35638 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Stag2O35638 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Stag2O35638 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Stag2O35638 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Stag2O35638 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Stag2O35638 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Stag2O35638 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Stag2O35638 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.8■□□□□ 0.28
Stag2O35638 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Gm6415-201ENSMUST00000118488 348 ntBASIC16.8■□□□□ 0.28
Stag2O35638 Gm15693-201ENSMUST00000120470 637 ntBASIC16.8■□□□□ 0.28
Stag2O35638 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Stag2O35638 Gm18766-201ENSMUST00000189811 808 ntBASIC16.8■□□□□ 0.28
Stag2O35638 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.8■□□□□ 0.28
Stag2O35638 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Stag2O35638 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.8■□□□□ 0.28
Stag2O35638 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Stag2O35638 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Stag2O35638 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag2O35638 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag2O35638 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Stag2O35638 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag2O35638 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag2O35638 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag2O35638 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag2O35638 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag2O35638 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Stag2O35638 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms