Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Atf6bO35451 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Atf6bO35451 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Atf6bO35451 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Atf6bO35451 Gm5177-201ENSMUST00000183092 997 ntBASIC12.78□□□□□ -0.36
Atf6bO35451 Gm17968-201ENSMUST00000194902 784 ntBASIC12.78□□□□□ -0.36
Atf6bO35451 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.78□□□□□ -0.36
Atf6bO35451 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Gm10175-201ENSMUST00000086013 645 ntBASIC12.78□□□□□ -0.36
Atf6bO35451 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Atf6bO35451 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.78□□□□□ -0.36
Atf6bO35451 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Atf6bO35451 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Atf6bO35451 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atf6bO35451 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Atf6bO35451 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Atf6bO35451 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atf6bO35451 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atf6bO35451 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atf6bO35451 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.77□□□□□ -0.36
Atf6bO35451 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atf6bO35451 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Atf6bO35451 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Atf6bO35451 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.77□□□□□ -0.37
Atf6bO35451 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Atf6bO35451 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.77□□□□□ -0.37
Atf6bO35451 Thap2-203ENSMUST00000218989 527 ntBASIC12.77□□□□□ -0.37
Atf6bO35451 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.77□□□□□ -0.37
Atf6bO35451 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Atf6bO35451 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.77□□□□□ -0.37
Atf6bO35451 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Atf6bO35451 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Atf6bO35451 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Atf6bO35451 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.76□□□□□ -0.37
Atf6bO35451 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Atf6bO35451 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Atf6bO35451 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.76□□□□□ -0.37
Atf6bO35451 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Atf6bO35451 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.76□□□□□ -0.37
Atf6bO35451 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.76□□□□□ -0.37
Atf6bO35451 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Atf6bO35451 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
Atf6bO35451 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.76□□□□□ -0.37
Atf6bO35451 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.76□□□□□ -0.37
Atf6bO35451 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Atf6bO35451 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms