Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.12■□□□□ 0.01
Trove2O08848 Gm18622-201ENSMUST00000219361 595 ntBASIC15.12■□□□□ 0.01
Trove2O08848 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trove2O08848 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trove2O08848 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.12■□□□□ 0.01
Trove2O08848 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Trove2O08848 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trove2O08848 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trove2O08848 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.11■□□□□ 0.01
Trove2O08848 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.11■□□□□ 0.01
Trove2O08848 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.11■□□□□ 0.01
Trove2O08848 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Trove2O08848 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.11■□□□□ 0.01
Trove2O08848 Gm9103-201ENSMUST00000119371 405 ntBASIC15.11■□□□□ 0.01
Trove2O08848 Gm8344-201ENSMUST00000119813 856 ntBASIC15.11■□□□□ 0.01
Trove2O08848 Gm28033-201ENSMUST00000184224 96 ntBASIC15.11■□□□□ 0.01
Trove2O08848 Gm19164-201ENSMUST00000210667 640 ntBASIC15.11■□□□□ 0.01
Trove2O08848 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trove2O08848 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Trove2O08848 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trove2O08848 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trove2O08848 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.1■□□□□ 0.01
Trove2O08848 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trove2O08848 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trove2O08848 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trove2O08848 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.1■□□□□ 0.01
Trove2O08848 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.1■□□□□ 0.01
Trove2O08848 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trove2O08848 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trove2O08848 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trove2O08848 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trove2O08848 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.09■□□□□ 0.01
Trove2O08848 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.09■□□□□ 0.01
Trove2O08848 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.09■□□□□ 0.01
Trove2O08848 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.09■□□□□ 0.01
Trove2O08848 Gm12008-201ENSMUST00000117791 755 ntBASIC15.09■□□□□ 0.01
Trove2O08848 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trove2O08848 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Trove2O08848 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trove2O08848 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trove2O08848 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trove2O08848 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms