Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdh1F7BJK1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Gm9103-201ENSMUST00000119371 405 ntBASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdh1F7BJK1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdh1F7BJK1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdh1F7BJK1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms