Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
BC035044E0CXF8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.48□□□□□ -0.41
BC035044E0CXF8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
BC035044E0CXF8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
BC035044E0CXF8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.47□□□□□ -0.41
BC035044E0CXF8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.47□□□□□ -0.41
BC035044E0CXF8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
BC035044E0CXF8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Gm43347-201ENSMUST00000200226 580 ntBASIC12.47□□□□□ -0.41
BC035044E0CXF8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
BC035044E0CXF8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
BC035044E0CXF8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.46□□□□□ -0.41
BC035044E0CXF8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.46□□□□□ -0.41
BC035044E0CXF8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Gm7222-201ENSMUST00000117512 906 ntBASIC12.46□□□□□ -0.41
BC035044E0CXF8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.46□□□□□ -0.41
BC035044E0CXF8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms