Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn7aB1AYL1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Gm13689-201ENSMUST00000119360 685 ntBASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Mir692-1-201ENSMUST00000102263 109 ntBASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Gm13226-201ENSMUST00000117838 404 ntBASIC18.63■□□□□ 0.57
Scn7aB1AYL1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn7aB1AYL1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.62■□□□□ 0.57
Scn7aB1AYL1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 CT030704.2-201ENSMUST00000228887 494 ntBASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn7aB1AYL1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Gm6983-201ENSMUST00000214912 628 ntBASIC18.61■□□□□ 0.57
Scn7aB1AYL1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn7aB1AYL1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Gm9899-201ENSMUST00000065519 555 ntBASIC18.6■□□□□ 0.57
Scn7aB1AYL1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Gm6244-201ENSMUST00000178732 841 ntBASIC18.6■□□□□ 0.57
Scn7aB1AYL1 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scn7aB1AYL1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms