Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Gm22331-201ENSMUST00000158066 136 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 Gm16505-201ENSMUST00000179981 232 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Gm7467-201ENSMUST00000185173 652 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 Gm43818-201ENSMUST00000200605 466 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Hivep3-201ENSMUST00000084306 2973 ntBASIC10.97□□□□□ -0.65
Col6a5A6H584 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 B9d1os-201ENSMUST00000137010 674 ntBASIC10.97□□□□□ -0.65
Col6a5A6H584 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Col6a5A6H584 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Gm45098-201ENSMUST00000207179 657 ntBASIC10.97□□□□□ -0.65
Col6a5A6H584 Gm18935-201ENSMUST00000212692 664 ntBASIC10.97□□□□□ -0.65
Col6a5A6H584 Gm5425-201ENSMUST00000214125 459 ntBASIC10.97□□□□□ -0.65
Col6a5A6H584 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a5A6H584 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a5A6H584 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a5A6H584 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Col6a5A6H584 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Col6a5A6H584 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Col6a5A6H584 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Col6a5A6H584 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.97□□□□□ -0.65
Col6a5A6H584 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.97□□□□□ -0.65
Col6a5A6H584 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.97□□□□□ -0.65
Col6a5A6H584 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.97□□□□□ -0.65
Col6a5A6H584 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col6a5A6H584 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.96□□□□□ -0.65
Col6a5A6H584 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a5A6H584 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Col6a5A6H584 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a5A6H584 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC10.96□□□□□ -0.65
Col6a5A6H584 Snord83b-201ENSMUST00000104546 94 ntBASIC10.96□□□□□ -0.65
Col6a5A6H584 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Col6a5A6H584 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm12241-201ENSMUST00000118330 726 ntBASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm14381-201ENSMUST00000122105 414 ntBASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm43830-201ENSMUST00000198760 1067 ntBASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm6334-201ENSMUST00000207083 228 ntBASIC10.96□□□□□ -0.65
Col6a5A6H584 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm17795-201ENSMUST00000214505 757 ntBASIC10.96□□□□□ -0.65
Col6a5A6H584 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Col6a5A6H584 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a5A6H584 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a5A6H584 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a5A6H584 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col6a5A6H584 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.96□□□□□ -0.65
Col6a5A6H584 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Col6a5A6H584 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Col6a5A6H584 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a5A6H584 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a5A6H584 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a5A6H584 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a5A6H584 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a5A6H584 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.96□□□□□ -0.66
Col6a5A6H584 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a5A6H584 Gm44729-201ENSMUST00000206759 2052 ntBASIC10.96□□□□□ -0.66
Col6a5A6H584 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a5A6H584 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col6a5A6H584 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.95□□□□□ -0.66
Col6a5A6H584 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col6a5A6H584 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col6a5A6H584 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms