Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm12029-201ENSMUST00000120073 832 ntBASIC7.6□□□□□ -1.19
Ubr4A2AN08 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Prkcz2-201ENSMUST00000206136 1756 ntBASIC7.6□□□□□ -1.19
Ubr4A2AN08 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Gm13886-201ENSMUST00000117876 1183 ntBASIC7.6□□□□□ -1.19
Ubr4A2AN08 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Mxra8os-201ENSMUST00000097740 687 ntBASIC7.6□□□□□ -1.19
Ubr4A2AN08 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC7.6□□□□□ -1.19
Ubr4A2AN08 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Gm7666-201ENSMUST00000146631 819 ntBASIC7.59□□□□□ -1.19
Ubr4A2AN08 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Gm6771-201ENSMUST00000182716 1001 ntBASIC7.59□□□□□ -1.19
Ubr4A2AN08 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC7.59□□□□□ -1.19
Ubr4A2AN08 Gm5869-201ENSMUST00000200248 1257 ntBASIC7.59□□□□□ -1.19
Ubr4A2AN08 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Gm19680-201ENSMUST00000095050 1513 ntBASIC7.59□□□□□ -1.19
Ubr4A2AN08 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Ubr4A2AN08 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ubr4A2AN08 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ubr4A2AN08 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Ubr4A2AN08 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.2
Ubr4A2AN08 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC7.59□□□□□ -1.2
Ubr4A2AN08 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Ubr4A2AN08 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ubr4A2AN08 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ubr4A2AN08 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Ubr4A2AN08 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC7.58□□□□□ -1.2
Ubr4A2AN08 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ubr4A2AN08 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ubr4A2AN08 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ubr4A2AN08 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ubr4A2AN08 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ubr4A2AN08 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Ubr4A2AN08 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ubr4A2AN08 Gm5425-201ENSMUST00000214125 459 ntBASIC7.58□□□□□ -1.2
Ubr4A2AN08 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Ubr4A2AN08 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Ubr4A2AN08 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms