Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12-1A0N8R1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Trav12-1A0N8R1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav12-1A0N8R1 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Trav12-1A0N8R1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12-1A0N8R1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Gm8749-201ENSMUST00000117737 331 ntBASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Gm18246-201ENSMUST00000221023 728 ntBASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Birc2-201ENSMUST00000054878 378 ntBASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12-1A0N8R1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Gm7230-201ENSMUST00000173026 815 ntBASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Gm9726-201ENSMUST00000180321 678 ntBASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Gm43347-201ENSMUST00000200226 580 ntBASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12-1A0N8R1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms