Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm15427-201ENSMUST00000117288 531 ntBASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mir1895-201ENSMUST00000122615 79 ntBASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm25925-201ENSMUST00000158314 306 ntBASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm45747-201ENSMUST00000212203 999 ntBASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm13410-201ENSMUST00000117058 1415 ntBASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms