Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm6257-201ENSMUST00000163864 910 ntBASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm27867-201ENSMUST00000184778 125 ntBASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm43347-201ENSMUST00000200226 580 ntBASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Birc2-201ENSMUST00000054878 378 ntBASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm13830-205ENSMUST00000201195 1155 ntBASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav6n-6A0A075B6B2 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm12008-201ENSMUST00000117791 755 ntBASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm17971-201ENSMUST00000190239 806 ntBASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm8655-201ENSMUST00000221159 852 ntBASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav6n-6A0A075B6B2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms