Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav9d-1A0A075B699 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav9d-1A0A075B699 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Gm7222-201ENSMUST00000117512 906 ntBASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-1A0A075B699 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-1A0A075B699 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav9d-1A0A075B699 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav9d-1A0A075B699 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-1A0A075B699 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms