Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.21□□□□□ -0.61
Trdv1A0A075B657 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Gm27704-201ENSMUST00000185094 107 ntBASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trdv1A0A075B657 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trdv1A0A075B657 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gm12644-201ENSMUST00000119935 606 ntBASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.2□□□□□ -0.62
Trdv1A0A075B657 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trdv1A0A075B657 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.19□□□□□ -0.62
Trdv1A0A075B657 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms