Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav16A0A075B653 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Gm6345-202ENSMUST00000180900 204 ntBASIC11.38□□□□□ -0.59
Trav16A0A075B653 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.38□□□□□ -0.59
Trav16A0A075B653 Gm18622-201ENSMUST00000219361 595 ntBASIC11.38□□□□□ -0.59
Trav16A0A075B653 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav16A0A075B653 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.37□□□□□ -0.59
Trav16A0A075B653 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Gm15565-201ENSMUST00000118890 427 ntBASIC11.37□□□□□ -0.59
Trav16A0A075B653 Gm15794-201ENSMUST00000120182 631 ntBASIC11.37□□□□□ -0.59
Trav16A0A075B653 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav16A0A075B653 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.37□□□□□ -0.59
Trav16A0A075B653 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.37□□□□□ -0.59
Trav16A0A075B653 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav16A0A075B653 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.36□□□□□ -0.59
Trav16A0A075B653 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav16A0A075B653 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms