Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm12895-201ENSMUST00000122214 226 ntBASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm27357-201ENSMUST00000183754 135 ntBASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm18489-201ENSMUST00000172565 551 ntBASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm7284-201ENSMUST00000131667 944 ntBASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms