Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav16d-dv11A0A075B617 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav16d-dv11A0A075B617 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms