Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
PdfS4R2K0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
PdfS4R2K0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
PdfS4R2K0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
PdfS4R2K0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Rubie-203ENSMUST00000227803 2430 ntBASIC11.33□□□□□ -0.6
PdfS4R2K0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC11.33□□□□□ -0.6
PdfS4R2K0 Gm7153-201ENSMUST00000117092 455 ntBASIC11.33□□□□□ -0.6
PdfS4R2K0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.33□□□□□ -0.6
PdfS4R2K0 Mir6404-201ENSMUST00000183699 94 ntBASIC11.33□□□□□ -0.6
PdfS4R2K0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
PdfS4R2K0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
PdfS4R2K0 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.33□□□□□ -0.6
PdfS4R2K0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.33□□□□□ -0.6
PdfS4R2K0 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PdfS4R2K0 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.33□□□□□ -0.6
PdfS4R2K0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
PdfS4R2K0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
PdfS4R2K0 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.32□□□□□ -0.6
PdfS4R2K0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.32□□□□□ -0.6
PdfS4R2K0 Gm13312-201ENSMUST00000119631 718 ntBASIC11.32□□□□□ -0.6
PdfS4R2K0 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.32□□□□□ -0.6
PdfS4R2K0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Gm28033-201ENSMUST00000184224 96 ntBASIC11.32□□□□□ -0.6
PdfS4R2K0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.32□□□□□ -0.6
PdfS4R2K0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.32□□□□□ -0.6
PdfS4R2K0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.32□□□□□ -0.6
PdfS4R2K0 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.32□□□□□ -0.6
PdfS4R2K0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.32□□□□□ -0.6
PdfS4R2K0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PdfS4R2K0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.31□□□□□ -0.6
PdfS4R2K0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
PdfS4R2K0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.31□□□□□ -0.6
PdfS4R2K0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
PdfS4R2K0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
PdfS4R2K0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
PdfS4R2K0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.31□□□□□ -0.6
PdfS4R2K0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
PdfS4R2K0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
PdfS4R2K0 Gm17971-201ENSMUST00000190239 806 ntBASIC11.31□□□□□ -0.6
PdfS4R2K0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.31□□□□□ -0.6
PdfS4R2K0 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.31□□□□□ -0.6
PdfS4R2K0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms