Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
H2afb2S4R1M3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Gm13464-201ENSMUST00000119418 935 ntBASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Gm27301-201ENSMUST00000184012 127 ntBASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
H2afb2S4R1M3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Gm23547-201ENSMUST00000158210 271 ntBASIC14.71□□□□□ -0.05
H2afb2S4R1M3 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
H2afb2S4R1M3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb2S4R1M3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.71□□□□□ -0.06
H2afb2S4R1M3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb2S4R1M3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb2S4R1M3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb2S4R1M3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb2S4R1M3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb2S4R1M3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
H2afb2S4R1M3 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Gm17968-201ENSMUST00000194902 784 ntBASIC14.7□□□□□ -0.06
H2afb2S4R1M3 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
H2afb2S4R1M3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms