Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.67□□□□□ -0.22
Upk1bQ9Z2C6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1bQ9Z2C6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Gm23634-201ENSMUST00000175071 91 ntBASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1bQ9Z2C6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Upk1bQ9Z2C6 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1bQ9Z2C6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1bQ9Z2C6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1bQ9Z2C6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1bQ9Z2C6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1bQ9Z2C6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1bQ9Z2C6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1bQ9Z2C6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms