Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a4Q9QZR9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Gm6334-201ENSMUST00000207083 228 ntBASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a4Q9QZR9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm29396-201ENSMUST00000185659 716 ntBASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm8213-201ENSMUST00000118191 441 ntBASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm44364-201ENSMUST00000198368 141 ntBASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm43818-201ENSMUST00000200605 466 ntBASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm19309-201ENSMUST00000218295 205 ntBASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a4Q9QZR9 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Gm18753-201ENSMUST00000201000 566 ntBASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Mir497b-201ENSMUST00000093601 125 ntBASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.41□□□□□ -0.1
Col4a4Q9QZR9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms