Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.84□□□□□ -0.51
Smco4Q9JIS3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smco4Q9JIS3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Smco4Q9JIS3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Smco4Q9JIS3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Grk6-205ENSMUST00000224653 2976 ntBASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Gm7638-201ENSMUST00000121348 967 ntBASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smco4Q9JIS3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Gm11249-201ENSMUST00000117071 859 ntBASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Gm13148-201ENSMUST00000118892 745 ntBASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Gm6257-201ENSMUST00000163864 910 ntBASIC11.82□□□□□ -0.52
Smco4Q9JIS3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.82□□□□□ -0.52
Smco4Q9JIS3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smco4Q9JIS3 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms