Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccl28Q9JIL2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Gm7222-201ENSMUST00000117512 906 ntBASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Gm7787-201ENSMUST00000216858 688 ntBASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Gm14026-201ENSMUST00000120625 1789 ntBASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccl28Q9JIL2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Gm7153-201ENSMUST00000117092 455 ntBASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccl28Q9JIL2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.9□□□□□ -0.51
Ccl28Q9JIL2 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms