Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ush1cQ9ES64 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ush1cQ9ES64 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ush1cQ9ES64 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ush1cQ9ES64 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ush1cQ9ES64 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ush1cQ9ES64 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ush1cQ9ES64 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ush1cQ9ES64 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ush1cQ9ES64 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ush1cQ9ES64 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Ush1cQ9ES64 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.89■□□□□ 0.3
Ush1cQ9ES64 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Ush1cQ9ES64 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.89■□□□□ 0.3
Ush1cQ9ES64 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Gm9103-201ENSMUST00000119371 405 ntBASIC16.89■□□□□ 0.29
Ush1cQ9ES64 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ush1cQ9ES64 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ush1cQ9ES64 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Ush1cQ9ES64 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ush1cQ9ES64 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ush1cQ9ES64 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ush1cQ9ES64 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ush1cQ9ES64 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ush1cQ9ES64 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ush1cQ9ES64 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms