Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Gm17420-201ENSMUST00000164753 153 ntBASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Mir7654-201ENSMUST00000185082 70 ntBASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nkx2-4Q9EQM3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.02□□□□□ -0.01
Nkx2-4Q9EQM3 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nkx2-4Q9EQM3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-4Q9EQM3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nkx2-4Q9EQM3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-4Q9EQM3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-4Q9EQM3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Nkx2-4Q9EQM3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-4Q9EQM3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nkx2-4Q9EQM3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Gm13226-201ENSMUST00000117838 404 ntBASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nkx2-4Q9EQM3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Gm26917-202ENSMUST00000192833 3329 ntBASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 AA619741-201ENSMUST00000195095 646 ntBASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Gm44974-201ENSMUST00000206387 1279 ntBASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Gm18307-201ENSMUST00000206864 949 ntBASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 AC140451.2-201ENSMUST00000228030 664 ntBASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
Nkx2-4Q9EQM3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms