Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdc40Q9DC48 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdc40Q9DC48 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdc40Q9DC48 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Gm43767-201ENSMUST00000198933 381 ntBASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.65□□□□□ -0.22
Cdc40Q9DC48 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms