Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.36■□□□□ 0.69
U2af1Q9D883 Gm45098-201ENSMUST00000207179 657 ntBASIC19.36■□□□□ 0.69
U2af1Q9D883 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
U2af1Q9D883 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
U2af1Q9D883 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
U2af1Q9D883 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Gm42632-201ENSMUST00000201707 2411 ntBASIC19.35■□□□□ 0.69
U2af1Q9D883 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Gm13015-201ENSMUST00000118674 204 ntBASIC19.35■□□□□ 0.69
U2af1Q9D883 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.35■□□□□ 0.69
U2af1Q9D883 Gm6756-201ENSMUST00000180647 1620 ntBASIC19.35■□□□□ 0.69
U2af1Q9D883 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
U2af1Q9D883 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.35■□□□□ 0.69
U2af1Q9D883 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
U2af1Q9D883 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.34■□□□□ 0.69
U2af1Q9D883 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC19.34■□□□□ 0.69
U2af1Q9D883 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
U2af1Q9D883 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
U2af1Q9D883 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
U2af1Q9D883 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
U2af1Q9D883 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
U2af1Q9D883 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
U2af1Q9D883 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2af1Q9D883 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2af1Q9D883 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2af1Q9D883 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2af1Q9D883 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2af1Q9D883 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
U2af1Q9D883 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
U2af1Q9D883 Gm25925-201ENSMUST00000158314 306 ntBASIC19.33■□□□□ 0.68
U2af1Q9D883 Gm9824-201ENSMUST00000178707 561 ntBASIC19.33■□□□□ 0.68
U2af1Q9D883 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.33■□□□□ 0.68
U2af1Q9D883 Mir6956-201ENSMUST00000183598 62 ntBASIC19.33■□□□□ 0.68
U2af1Q9D883 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.33■□□□□ 0.68
U2af1Q9D883 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
U2af1Q9D883 Olfr286-202ENSMUST00000205305 969 ntBASIC19.33■□□□□ 0.68
U2af1Q9D883 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.33■□□□□ 0.68
U2af1Q9D883 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
U2af1Q9D883 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
U2af1Q9D883 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
U2af1Q9D883 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
U2af1Q9D883 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC19.32■□□□□ 0.68
U2af1Q9D883 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.32■□□□□ 0.68
U2af1Q9D883 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.32■□□□□ 0.68
U2af1Q9D883 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.32■□□□□ 0.68
U2af1Q9D883 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.32■□□□□ 0.68
U2af1Q9D883 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.32■□□□□ 0.68
U2af1Q9D883 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
U2af1Q9D883 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
U2af1Q9D883 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
U2af1Q9D883 Gm22175-201ENSMUST00000175007 78 ntBASIC19.31■□□□□ 0.68
U2af1Q9D883 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.31■□□□□ 0.68
U2af1Q9D883 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
U2af1Q9D883 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms