Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.99□□□□□ -0.01
Cldnd1Q9CQX5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldnd1Q9CQX5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldnd1Q9CQX5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldnd1Q9CQX5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldnd1Q9CQX5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cldnd1Q9CQX5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cldnd1Q9CQX5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Gm15460-201ENSMUST00000118147 391 ntBASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Gm37230-201ENSMUST00000194491 818 ntBASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Gm45331-201ENSMUST00000209868 554 ntBASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cldnd1Q9CQX5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cldnd1Q9CQX5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Gm8749-201ENSMUST00000117737 331 ntBASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Gm27839-201ENSMUST00000184242 106 ntBASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Cldnd1Q9CQX5 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cldnd1Q9CQX5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms