Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retreg3Q9CQV4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Gm15427-201ENSMUST00000117288 531 ntBASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 CT025561.1-201ENSMUST00000214972 674 ntBASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg3Q9CQV4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Gm14701-201ENSMUST00000117156 348 ntBASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Gm22119-201ENSMUST00000175594 99 ntBASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retreg3Q9CQV4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Gm43974-201ENSMUST00000205080 684 ntBASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Gm8396-201ENSMUST00000057361 823 ntBASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retreg3Q9CQV4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms