Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt88Q9CPR6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Gm29518-201ENSMUST00000190858 372 ntBASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Gm8655-201ENSMUST00000221159 852 ntBASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Krt88Q9CPR6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Krt88Q9CPR6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms