Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Gm38225-201ENSMUST00000194001 393 ntBASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Gm27533-201ENSMUST00000183800 152 ntBASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Prpf8Q99PV0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Prpf8Q99PV0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.06□□□□□ -0.48
Prpf8Q99PV0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Prpf8Q99PV0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms