Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Gm18489-201ENSMUST00000172565 551 ntBASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Thumpd1Q99J36 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Gm27646-201ENSMUST00000183989 110 ntBASIC13.13□□□□□ -0.31
Thumpd1Q99J36 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.13□□□□□ -0.31
Thumpd1Q99J36 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.13□□□□□ -0.31
Thumpd1Q99J36 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.12□□□□□ -0.31
Thumpd1Q99J36 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Thumpd1Q99J36 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.11□□□□□ -0.31
Thumpd1Q99J36 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms