Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 AL023806.1-201ENST00000603994 1649 ntBASIC20.52■□□□□ 0.88
PGBD1Q96JS3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
PGBD1Q96JS3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PGBD1Q96JS3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PGBD1Q96JS3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.52■□□□□ 0.87
PGBD1Q96JS3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PGBD1Q96JS3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 KRT8P47-201ENST00000604727 1398 ntBASIC20.51■□□□□ 0.87
PGBD1Q96JS3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 IGHV3-47-201ENST00000425060 335 ntBASIC20.51■□□□□ 0.87
PGBD1Q96JS3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 AC112698.1-201ENST00000510299 916 ntBASIC20.51■□□□□ 0.87
PGBD1Q96JS3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 AC138894.3-201ENST00000603787 634 ntBASIC20.51■□□□□ 0.87
PGBD1Q96JS3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 LINC00304-203ENST00000565008 1864 ntBASIC20.51■□□□□ 0.87
PGBD1Q96JS3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 CROCCP2-202ENST00000412962 2773 ntBASIC20.51■□□□□ 0.87
PGBD1Q96JS3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PGBD1Q96JS3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 NSUN5P1-202ENST00000421140 1535 ntBASIC20.5■□□□□ 0.87
PGBD1Q96JS3 NSUN5P2-203ENST00000457352 1529 ntBASIC20.5■□□□□ 0.87
PGBD1Q96JS3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 AC104819.1-201ENST00000504587 486 ntBASIC20.5■□□□□ 0.87
PGBD1Q96JS3 FOSL1P1-201ENST00000511041 816 ntBASIC20.5■□□□□ 0.87
PGBD1Q96JS3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 AC099336.1-202ENST00000602961 463 ntBASIC20.5■□□□□ 0.87
PGBD1Q96JS3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 AL353801.3-201ENST00000609898 542 ntBASIC20.5■□□□□ 0.87
PGBD1Q96JS3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.5■□□□□ 0.87
PGBD1Q96JS3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.5■□□□□ 0.87
PGBD1Q96JS3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PGBD1Q96JS3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.49■□□□□ 0.87
PGBD1Q96JS3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.49■□□□□ 0.87
PGBD1Q96JS3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.49■□□□□ 0.87
PGBD1Q96JS3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD1Q96JS3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD1Q96JS3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PGBD1Q96JS3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms