Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 AC211429.1-201ENST00000415277 523 ntBASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 LINC01023-201ENST00000606054 436 ntBASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 AL137013.1-201ENST00000432946 1228 ntBASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 DUTP2-201ENST00000519164 463 ntBASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 AC092865.7-201ENST00000641832 219 ntBASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RTN4IP1Q8WWV3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 TERF1P1-201ENST00000311003 1181 ntBASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 AL118508.1-201ENST00000613502 2345 ntBASIC14.89□□□□□ -0.03
RTN4IP1Q8WWV3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms