Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Gm19164-201ENSMUST00000210667 640 ntBASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh18Q8VHR0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Gm15372-201ENSMUST00000120729 834 ntBASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Gm27357-201ENSMUST00000183754 135 ntBASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh18Q8VHR0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Gm4459-201ENSMUST00000118750 468 ntBASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Gm12497-201ENSMUST00000138778 237 ntBASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Gm7506-201ENSMUST00000207758 815 ntBASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Gm18622-201ENSMUST00000219361 595 ntBASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh18Q8VHR0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Gm12895-201ENSMUST00000122214 226 ntBASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Gm10819-201ENSMUST00000099988 561 ntBASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh18Q8VHR0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms