Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Gm12008-201ENSMUST00000117791 755 ntBASIC14.76□□□□□ -0.05
Vps39Q8R5L3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vps39Q8R5L3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vps39Q8R5L3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.74□□□□□ -0.05
Vps39Q8R5L3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps39Q8R5L3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms