Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim29Q8R2Q0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Gm5177-201ENSMUST00000183092 997 ntBASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim29Q8R2Q0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Gm9727-201ENSMUST00000161387 555 ntBASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Gm18206-201ENSMUST00000207027 926 ntBASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim29Q8R2Q0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim29Q8R2Q0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Gm16198-201ENSMUST00000118766 670 ntBASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 AW822252-206ENSMUST00000208904 237 ntBASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms