Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Gm25255-201ENSMUST00000179579 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm24755-201ENSMUST00000179691 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm26506-201ENSMUST00000179692 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm25086-201ENSMUST00000179931 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm23243-201ENSMUST00000180047 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm24659-201ENSMUST00000180212 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm24169-201ENSMUST00000180244 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm23689-201ENSMUST00000180354 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm27359-201ENSMUST00000184153 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm27785-201ENSMUST00000184268 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm27466-201ENSMUST00000184396 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm27703-201ENSMUST00000184836 110 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm43767-201ENSMUST00000198933 381 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hoxc12Q8K5B8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Gm11543-201ENSMUST00000120758 370 ntBASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hoxc12Q8K5B8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Hoxc12Q8K5B8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hoxc12Q8K5B8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hoxc12Q8K5B8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms